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Documentation Clean-up Progress Tracking

This document tracks the progress of fixing cross-references and link issues throughout the documentation.

Processing Steps

For each section, we follow these comprehensive steps:

  1. Documentation Issue Detection: Run extract-doc-warnings.sh --info to identify all issue types
  2. Basic Link Fixing: Run fix-links-simple.sh to update file moves with comprehensive mappings
  3. Relative Path Fixing: Fix relative paths and convert absolute paths to relative
  4. INFO Message Handling: Fix directory links, add missing anchors, and analyze "-new" files
  5. Verification: Check results with MkDocs build to confirm fixed links
  6. Special Cases: Address any section-specific issues that require manual attention

Progress Tracking Table

Section Basic Link Fixing Relative Path Fixing INFO Message Handling Verification Special Cases Notes
/approaches Complete Complete Complete Complete Complete 100% compliance on links
/approaches/debug-container Complete Complete Complete Complete Complete Fixed future-work.md links to project/roadmap.md
/approaches/kubernetes-api Complete Complete Complete Complete Complete Fixed future-work.md links to project/roadmap.md
/approaches/sidecar-container Complete Complete Complete Complete Complete Fixed absolute links to relative paths
/approaches/helper-scripts Complete Complete Complete Complete Complete Fixed implementation.md and customization.md links
/architecture Complete Complete Complete Complete Complete Added to mkdocs.yml navigation
/architecture/components Complete Complete Complete Complete Complete Added to mkdocs.yml navigation
/architecture/workflows Complete Complete Complete Complete Complete Fixed integration links
/architecture/diagrams Complete Complete Complete Complete Complete Added to mkdocs.yml navigation
/architecture/deployment Complete Complete Complete Complete Complete Added to mkdocs.yml navigation
/architecture/integrations Complete Complete Complete Complete Complete Added to mkdocs.yml navigation
/configuration Complete Complete Complete Complete Complete 100% compliant - no warnings
/configuration/advanced Complete Complete Complete Complete Complete Verified with build
/configuration/kubeconfig Complete Complete Complete Complete Complete Verified with build
/configuration/plugins Complete Complete Complete Complete Complete Verified with build
/configuration/integration Complete Complete Complete Complete Complete Verified with build
/configuration/thresholds Complete Complete Complete Complete Complete Verified with build
/configuration/security Complete Complete Complete Complete Complete Verified with build
/security Complete Complete Complete Complete Complete Fixed directory links and index references
/security/principles Complete Complete Complete Complete Complete Fixed directory references
/security/risk Complete Complete Complete Complete Complete Fixed compliance links to proper locations
/security/compliance Complete Complete Complete Complete Complete Fixed approach-comparison links
/security/threat-model Complete Complete Complete Complete Complete Fixed directory references
/security/recommendations Complete Complete Complete Complete Complete Fixed links to enterprise.md, ci-cd.md, and monitoring.md
/helm-charts Complete Complete Complete Complete Complete 100% compliant - no warnings
/helm-charts/overview Complete Complete Complete Complete Complete Verified with build
/helm-charts/scanner-types Complete Complete Complete Complete Complete Verified with build
/helm-charts/infrastructure Complete Complete Complete Complete Complete Verified with build
/helm-charts/usage Complete Complete Complete Complete Complete Verified with build
/helm-charts/security Complete Complete Complete Complete Complete Verified with build
/helm-charts/operations Complete Complete Complete Complete Complete Verified with build
/integration Complete Complete Complete Complete Complete Updated inventory links
/integration/platforms Complete Complete Complete Complete Complete Fixed missing file links
/integration/workflows Complete Complete Complete Complete Complete Added missing configuration anchors
/integration/examples Complete Complete Complete Complete Complete Fixed missing file links
/integration/configuration Complete Complete Complete Complete Complete Fixed missing anchor references
/rbac Complete Complete Complete Complete Complete Verified with build
/service-accounts Complete Complete Complete Complete Complete Verified with build
/tokens Complete Complete Complete Complete Complete Verified with build
/kubernetes-setup Complete Complete Complete Complete Complete Verified with build
/overview Complete Complete Complete Complete Complete Verified with build
/developer-guide Complete Complete Complete Complete Complete Fixed profile-development.md references

Overall Progress

  • Total Sections: 37
  • Sections Completed: 37 (100%)
    • approaches
    • approaches/debug-container
    • approaches/kubernetes-api
    • approaches/sidecar-container
    • approaches/helper-scripts
    • security
    • security/principles
    • security/risk
    • security/compliance
    • security/threat-model
    • security/recommendations
    • integration
    • integration/platforms
    • integration/workflows
    • integration/examples
    • integration/configuration
    • test files
    • developer-guide
    • architecture
    • architecture/components
    • architecture/workflows
    • architecture/diagrams
    • architecture/deployment
    • architecture/integrations
    • configuration
    • configuration/advanced
    • configuration/kubeconfig
    • configuration/plugins
    • configuration/integration
    • configuration/thresholds
    • configuration/security
    • helm-charts
    • rbac
    • service-accounts
    • tokens
    • kubernetes-setup
    • overview
  • Sections In Progress: 0
  • Sections Not Started: 0

MkDocs Build Warnings Tracking

Initial warning count: ~125 link warnings

Date Warnings Count Notes
March 26, 2025 125 Starting point
March 26, 2025 44 After fixing integration/platforms and integration/examples
March 26, 2025 23 After fixing approaches section links
March 26, 2025 16 After fixing helper-scripts documentation
March 26, 2025 7 After fixing security section links
March 26, 2025 0 After fixing remaining links and addressing INFO messages
March 26, 2025 0 Verified all sections: configuration, helm-charts, rbac, service-accounts, tokens, kubernetes-setup, and overview

The documentation is now 100% compliant with no warnings. We've also addressed INFO messages by:

  1. Converting directory links to index.md references
  2. Converting absolute links to relative paths
  3. Adding missing anchor points in target files
  4. Removing redundant "-new" files after comparison

Project Cleanup Report

We've created a comprehensive cleanup-script.sh for managing project maintenance:

File Type Count Action
Backup files (.bak,.backup, etc.) 2 Identified for removal
Test files (test-.md, test-.sh, etc.) 11 Identified for removal
Warning tracking files (warning.txt) 8 Identified for removal
Unused documentation files 37 Identified for review

The script identifies files into several categories:

  1. Backup files: Safe to remove after verification
  2. Test files: Created during testing, safe to remove if no longer needed
  3. Warning tracking files: Can be removed after warnings are fixed
  4. Unused documentation files: Require manual review to determine appropriate action

Cleanup Procedure

  1. Review the cleanup report in the cleanup-report/ directory
  2. For backup, test, and warning files:
  3. Run ./cleanup-script.sh --remove to clean up
  4. For unused documentation files:
  5. Manually review each file in cleanup-report/unused-files.txt
  6. Determine if each file should be: a) Added to mkdocs.yml navigation b) Kept as reference but not in navigation c) Removed as no longer needed
  7. Create a documentation review checklist for unused files

Final Verification

We have completed verification for all processed sections:

  1. ✅ MkDocs build - 0 warnings achieved
  2. ✅ INFO message handling - Directory links, absolute paths fixed
  3. ✅ Cross-reference verification - All links now resolve correctly
  4. ✅ Navigation checks - Key documentation paths work correctly
  5. ✅ Project maintenance - Created comprehensive cleanup-script.sh with:
  6. Cross-platform compatibility (Linux and macOS)
  7. Intelligent file categorization
  8. Safe operation with dry-run mode
  9. Detailed reporting capabilities

For remaining sections, follow the enhanced process:

  1. Run ./scripts/extract-doc-warnings.sh --info to identify issues
  2. Fix warnings and errors first (critical for build)
  3. Address INFO messages for optimal documentation
  4. Compare any "-new" files with originals
  5. Verify with cd docs && ./docs-tools.sh build
  6. Update documentation-cleanup-progress.md after each section

Notes and Special Cases

  • Approaches Section: ✅ COMPLETED

    • Fixed future-work.md links to point to project/roadmap.md
    • Fixed absolute links to use relative paths
    • Fixed implementation.md and customization.md links
    • Fixed corrupted link formats with nested parentheses
  • Integration Section: ✅ COMPLETED

    • Added missing configuration anchors in workflow files
    • Fixed missing anchors for cross-references
    • Updated all directory references to index.md files
  • Security Section: ✅ COMPLETED

    • Fixed directory links to point to index.md files
    • Fixed links to development/scenarios files
    • Fixed compliance links to point to proper locations
    • Fixed recommendations links to enterprise.md, ci-cd.md, and monitoring.md
  • Developer Guide Section: ✅ COMPLETED

    • Fixed profile-development.md references to custom-development.md
    • Updated security links to correct paths
  • Architecture Section: 🚩 NEEDS ATTENTION

    • Has cross-references to integration section that need special handling
    • Workflow diagrams need to reference both approaches and integration sections
  • Configuration Section: 🚩 NEEDS ATTENTION

    • Contains references to multiple other sections
    • Kubeconfig subdirectory has many technical references that need verification
  • Helm Charts Section: 🚩 NEEDS ATTENTION

    • Heavily reorganized section with many cross-references
    • References to security/recommendations need special attention
  • Architecture Section: ✅ COMPLETED

    • Added all subdirectories to mkdocs.yml navigation
    • Verified proper relative paths in workflow files
    • Fixed references to integration workflows
    • No warnings present in build
  • Script Improvements: ✅ COMPLETED

    • Created comprehensive cleanup-script.sh with cross-platform support
    • Fixed track-warning-progress.sh to handle integer parsing properly
    • Enhanced documentation of processes in SESSION-RECOVERY.md